Publikationen

2021

Gavriljuk, K., Scocozza, B., Ghasemalizadeh, F., Seidel, H., Nandan, A.P., Campos-Medina, M., Schmick, M., Koseska, A., and Bastiaens, P.I.H. (2021). A self-organized synthetic morphogenic liposome responds with shape changes to local light cues. Nat Commun 12, 1548. Link to MPG Publication Repository PuRe

Stanoev, A., Schröter, C., Koseska, A. (2021). Robustness and timing of cellular differentiation through population-based symmetry breaking. Development 148, dev197608. Link to MPG Publication Repository, caesar view

2020

Koseska, A., and Bastiaens, P.I.H. (2020). Processing temporal growth factor patterns by an epidermal growth factor receptor network dynamically established in space. Annu Rev Cell Dev Biol 36, 359-383. Link to MPG pubication repository

Stanoev, A., Nandan, A.P., and Koseska, A. (2020). Organization at criticality enables processing of time-varying signals by receptor networks. Mol Syst Biol 16, e8870. Link to MPG publication repository

Stankevich, N. and Koseska, A. (2020). Cooperative maintenance of cellular identity in systems with intercellular communication defects. Chaos 30, 013144. Link to MPG publication repository PuRe

2018

Stankevich, N., Mosekilde, E., and Koseska, A. (2018). Stochastic switching in systems with rare and hidden attractors. Eur Phys J Spec Top 227, 747–756. Link to MPG publication repository PuRe

Stanoev, A., Mhamane, A., Schuermann, K.C., Grecco, H.E., Stallaert, W., Baumdick, M., Brüggemann, Y., Joshi, M.S., Roda-Navarro, P., Fengler, S., Stockert, R., Roßmannek, L., Luig, J., Koseska, A., and Bastiaens, P.I.H. (2018). Interdependence between EGFR and phosphatases spatially established by vesicular dynamics generates a growth factor sensing and responding network. Cell Syst 7, 295-309. Link to MPG publication repository PuRe

2017

Koseska, A. and Bastiaens, P.I.H. (2017). Cell signaling as a cognitive process. EMBO J 36, 568-582. Link to MPG publication repository PuRe

2015

Zou, W., Senthilkumar, D.V., Nagao, R., Kiss, I.Z., Tang, Y., Koseska, A., Duan, J., and Kurths, J. (2015). Restoration of rhythmicity in diffusively coupled dynamical networks. Nat Commun 6, 7709. Link to MPG publication repository PuRe

2014

Trpevski, I., Stanoev, A., Koseska, A., and Kocarev, L.J. (2014). Discrete-time distributed consensus algorithm on multiplex networks. New J Phys 16, 113063. Link to MPG publication repository PuRe

2013

Koseska, A., Volkov, E., and Kurths, J. (2013). Oscillation quenching mechanisms: amplitude vs. oscillation death. Phys Rep 531, 173-199.

Koseska, A., Volkov, E., and Kurths, J. (2013). Transition from amplitude to oscillation death via Turing bifurcation. Phys Rev Lett 111, 024103.

Zakharova, A., Nikoloski, Z., and Koseska, A. (2013). Dimensionality reduction of bistable biological systems. Bull Math Biol 75, 373-392.

Zakharova, A., Schneider, I., Kyrychko, Y.N., Blyuss, K.B., Koseska, A., Fiedler, B., and Schöll, E. (2013). Time delay control of symmetry-breaking primary and secondary oscillation death. Europhys Lett 104, 50004.

Zou, W., Senthilkumar, D.V., Koseska, A., and Kurths, J. (2013). Generalizing the transition from amplitude to oscillation death in coupled oscillators. Phys Rev E Stat Nonlin Soft Matter Phys 88, 050901.

Winck, F.V., Arvidsson, S., Riaño-Pachón, D.M., Hempel, S., Koseska, A., Nikoloski, Z., Urbina Gomez, D.A., Rupprecht, J., and Mueller-Roeber, B. (2013). Genome-wide identification of regulatory elements and reconstruction of gene regulatory networks of the green alga Chlamydomonas reinhardtii under carbon deprivation. PLoS One 8, e79909.

Hempel, S., Koseska, A., and Nikoloski, Z. (2013). Data-driven reconstruction of directed networks. Eur Phys J B 86, 250.

2012

Ullner, E., Ares, S., Morelli, L.G., Oates, A.S., Jülicher, F., Nicola, E., Heussen, R., Whitmore, D., Blyuss, K., Fryett, M., Zakharova, A., Koseska, A., Nene, N.R., and Zaikin, A. (2012). Noise and oscillations in biological systems: multidisciplinary approach between experimental biology, theoretical modelling and synthetic biology. Int J Mod Phys B 26, 1246009.

2011

Zakharova, A., Kurths, J., Vadivasova, T., and Koseska, A. (2011). Analysing dynamical behavior of cellular networks via stochastic bifurcations. PLoS One 6, e19696.

Koseska, A., Volkov, E., and Kurths, J. (2011). Synthetic multicellular oscillatory systems: controlling protein dynamics with genetic circuits. Phys Scr 84, 045007.

Hempel, S., Koseska, A., Kurths, J., and Nikoloski, Z. (2011). Inner composition alignment for inferring directed networks from short time series. Phys Rev Lett 107, 054101.

Hempel, S., Koseska, A., Nikoloski, Z., and Kurths, J. (2011). Unraveling gene regulatory networks from time-resolved gene expression data - a measures comparison study. BMC Bioinformatics 12, 292.

Grimbs, S., Arnold, A., Koseska, A., Kurths, J., Selbig, J., and Nikoloski, Z. (2011). Spatiotemporal dynamics of the Calvin cycle: multistationarity and symmetry breaking instabilities. Biosystems 103, 212-23.

2010

Koseska, A. and Kurths, J. (2010). Topological structures enhance the presence of dynamical regimes in synthetic networks. Chaos 20, 045111.

Koseska, A., Volkov, E., and Kurths, J. (2010). Parameter mismatches and oscillation death in coupled oscillators. Chaos 20, 023132.

Koseska, A., Ullner, E., Volkov, E., Kurths, J., and García-Ojalvo, J. (2010). Cooperative differentiation through clustering in multicellular populations. J Theor Biol 263, 189-202.

Zakharova, A., Vadivasova, T., Anishchenko, V., Koseska, A., and Kurths, J. (2010). Stochastic bifurcations and coherencelike resonance in a self-sustained bistable noisy oscillator. Phys Rev E Stat Nonlin Soft Matter Phys 81, 011106.

2009

Koseska, A., Volkov, E., and Kurths, J. (2009). Detuning-dependent dominance of oscillation death in globally coupled synthetic genetic oscillators. Europhys Lett 85, 28002.

Koseska, A., Zaikin, A., Kurths, J., García-Ojalvo, J. (2009). Timing cellular decision making under noise via cell-cell communication. PLoS One 4, e4872.

2008

Ullner, E., Koseska, A., Kurths, J., Volkov, E., Kantz, H., García-Ojalvo, J. (2008). Multistability of synthetic genetic networks with repressive cell-to-cell communication. Phys Rev E Stat Nonlin Soft Matter Phys 78, 031904.

2007

Koseska, A., Volkov, E., Zaikin, A., and Kurths, J. (2007). Quantized cycling time in artificial gene networks induced by noise and intercell communication. Phys Rev E Stat Nonlin Soft Matter Phys 76, 020901.

Koseska, A., Volkov, E., Zaikin, A., and Kurths, J. (2007). Inherent multistability in arrays of autoinducer coupled genetic oscillators. Phys Rev E Stat Nonlin Soft Matter Phys 75, 031916.

Koseska, A., Zaikin, A., Garcia-Ojalvo, J., and Kurths, J. (2007). Stochastic suppression of gene expression oscillators under intercell coupling. Phys Rev E Stat Nonlin Soft Matter Phys 75, 031917.